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Способы ускорения алгоритма выравнивания в анализе биологического генома

выпускная квалификационная работа бакалавра
descriptionPublicationkeyboard_double_arrow_right Other literature type 01 Jan 2018 Russian Publisher:Санкт-Петербургский политехнический университет Петра Великого

doi: 10.18720/spbpu/2/v18-5992

Способы ускорения алгоритма выравнивания в анализе биологического генома

Abstract

Настоящая выпускная квалификационная работа бакалавра посвящена исследованию этапа выравнивания ридов геномной последовательности в рамках выравнивания биологического генома на референс. В рамках работы рассмотрены современные методы выравнивания генома, предложены способы совершенствования алгоритма выравнивания геномной последовательности. Проведён сравнительный анализ параллельных реализации нескольких алгоритмов сортировки. Наиболее эффективный применён для сортировки генома.

Keywords

биоинформатика, риды, выравнивание генома, секвенирование, параллелизм

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citations
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
0
Average
Average
Average
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