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Improved differential evolution for microarray analysis

Authors: Indrajit Saha; Dariusz Plewczynski; Ujjwal Maulik; Sanghamitra Bandyopadhyay;

Improved differential evolution for microarray analysis

Abstract

Clustering is an important tool for analysing the microarray data to identify groups of co-expressed genes. The problem of fuzzy clustering in microarray data motivated us to develop an improved clustering algorithm. In this paper, an improved differential evolution based fuzzy clustering technique is proposed. The performance of the proposed improved differential evolution based fuzzy clustering technique has been compared with other state-of-the-art clustering algorithms for publicly available benchmark microarray data sets. Statistical and biological significance tests have been carried out to establish the statistical superiority of the proposed clustering approach and biological relevance of clusters of co-expressed genes, respectively.

Keywords

Gene Expression Profiling, Cluster Analysis, Microarray Analysis, Algorithms

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Powered by OpenAIRE graph
Found an issue? Give us feedback
selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
10
Average
Top 10%
Top 10%
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