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https://doi.org/10.1101/2024.0...
Article . 2024 . Peer-reviewed
License: CC BY
Data sources: Crossref
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Article . 2025 . Peer-reviewed
Data sources: Crossref
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ComputAgeBench: Epigenetic Aging Clocks Benchmark

Authors: Dmitrii Kriukov; Evgeniy Efimov; Ekaterina Kuzmina; Anastasiia Dudkovskaia; Ekaterina E. Khrameeva; Dmitry V. Dylov;

ComputAgeBench: Epigenetic Aging Clocks Benchmark

Abstract

AbstractThe success of clinical trials of longevity drugs relies heavily on identifying integrative health and aging biomarkers, such as biological age. Epigenetic aging clocks predict the biological age of an individual using their DNA methylation profiles, commonly retrieved from blood samples. However, there is no standardized methodology to validate and compare epigenetic clock models as yet. We proposeComputAgeBench, a unifying framework that comprises such a methodology and a dataset for comprehensive benchmarking of different clinically relevant aging clocks. Our methodology exploits the core idea that reliable aging clocks must be able to distinguish between healthy individuals and those with aging-accelerating conditions. Specifically, we collected and harmonized 66 public datasets of blood DNA methylation, covering 19 such conditions across different ages, and tested 13 published clock models. Additionally, we compiled 46 separate datasets to facilitate the training of new aging clocks. We believe our work will bring the fields of aging biology and machine learning closer together for the research on reliable biomarkers of health and aging.Codehttps://github.com/ComputationalAgingLab/ComputAgeDatasethttps://huggingface.co/datasets/computage/computage_bench

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
6
Top 10%
Average
Top 10%
hybrid
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