descriptionPublicationkeyboard_double_arrow_right Article 01 Aug 2013 English Publisher:American Society for MicrobiologyJournal:Journal of Clinical Microbiology, volume 51, pages 2,754-2,757 (issn: 0095-1137, eissn: 1098-660X,

Authors: Richard Harrigan; Maria Casadellà; Bonaventura Clotet; Christian Pou; Roger Paredes; Rocío Bellido; Teresa Puig;

doi: 10.1128/jcm.00935-13

pmid: 23761150

pmc: PMC3719662

RECall for Automated Genotypic Tropism Testing

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Abstract

ABSTRACT Standardization of sequence chromatogram analysis is required for consistent genotypic tropism determination across laboratories. A freely available, fast, and automated chromatogram analysis tool (RECall) provided tropism interpretations equivalent to those of manual sequence editing of 521 V3 loop HIV-1 population sequences, suggesting that RECall can be useful in standardizing genotypic tropism testing across laboratories.

Related Organizations

University of British Columbia
Canada
Autonomous University of Barcelona
Spain

Keywords

Automation, Laboratory, Viral Tropism, Molecular Diagnostic Techniques, Virology, HIV-1, Computational Biology, Humans

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