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Applied and Environmental Microbiology
Article . 2010 . Peer-reviewed
License: ASM Journals Non-Commercial TDM
Data sources: Crossref
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Quantification of Cyprinid Herpesvirus 3 in Environmental Water by Using an External Standard Virus

Authors: Mie N, Honjo; Toshifumi, Minamoto; Kazuaki, Matsui; Kimiko, Uchii; Hiroki, Yamanaka; Alata A, Suzuki; Yukihiro, Kohmatsu; +2 Authors

Quantification of Cyprinid Herpesvirus 3 in Environmental Water by Using an External Standard Virus

Abstract

ABSTRACTCyprinid herpesvirus 3 (CyHV-3), a lethal DNA virus that spreads in natural lakes and rivers, infects common carp and koi. We established a quantification method for CyHV-3 that includes a viral concentration method and quantitative PCR combined with an external standard virus. Viral concentration methods were compared using the cation-coated filter and ultrafiltration methods. The recovery of virus-like particles was similar for the two methods (cation-coated filter method, 44% ± 19%,n= 3; ultrafiltration method, 50% ± 3%,n= 3); however, the former method was faster and more suitable for routine determinations. The recovery of seeded CyHV-3 based on the cation-coated filter method varied by more than 3 orders of magnitude among the water samples. The recovery yield of CyHV-3 was significantly correlated with that of the seeded λ phage, and the average ratio of λ to the CyHV-3 recovery yield was 1.4, indicating that λ is useful as an external standard virus for determining the recovery yield of CyHV-3. Therefore, to quantify CyHV-3 in environmental water, a known amount of λ was added as an external standard virus to each water sample. Using this method, CyHV-3 DNA was detected in 6 of the 10 (60%) types of environmental water tested; the highest concentration of CyHV-3 DNA was 2 × 105copies liter−1. The lowest recovery limit of CyHV-3 DNA was 60 copies liter−1. This method is practical for monitoring CyHV-3 abundance in environmental water.

Keywords

Carps, Ultrafiltration, Reference Standards, Viral Load, Bacteriophage lambda, Polymerase Chain Reaction, Sensitivity and Specificity, Virology, Animals, Water Microbiology, Filtration, Herpesviridae

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
45
Top 10%
Top 10%
Top 10%
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