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Applied and Environmental Microbiology
Article . 2011 . Peer-reviewed
License: ASM Journals Non-Commercial TDM
Data sources: Crossref
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Analyses of both the alkB Gene Transcriptional Start Site and alkB Promoter-Inducing Properties of Rhodococcus sp. Strain BCP1 Grown on n -Alkanes

Authors: CAPPELLETTI, MARTINA; FEDI, STEFANO; FRASCARI, DARIO; H. Ohtake; R. J. Turner; ZANNONI, DAVIDE;

Analyses of both the alkB Gene Transcriptional Start Site and alkB Promoter-Inducing Properties of Rhodococcus sp. Strain BCP1 Grown on n -Alkanes

Abstract

ABSTRACT Rhodococcus sp. strain BCP1, known for its capacity to grow on short-chain n -alkanes (C 2 to C 7 ) and to cometabolize chlorinated solvents, was found to also utilize medium- and long-chain n -alkanes (C 12 to C 24 ) as energy and carbon sources. To examine this feature in detail, a chromosomal region which includes the alkB gene cluster encoding a non-heme di-iron monooxygenase ( alkB ), two rubredoxins, and one rubredoxin reductase was cloned from the BCP1 genome. Furthermore, the activity of the alkB gene promoter (P alkB ) was examined in the presence of gaseous, liquid, and solid n -alkanes along with intermediates of the putative n -alkane degradation pathway. A recombinant plasmid, pTP alkB LacZ, was constructed by inserting the lacZ gene downstream of P alkB , and it was used to transform Rhodococcus sp. strain BCP1. Measurements of β-galactosidase activity showed that P alkB is induced by C 6 to C 22 n -alkanes. Conversely, C 2 to C 5 and >C 22 n -alkanes and alkenes, such as hexene, were not inducers of alkB expression. The effects on P alkB expression induced by alternative carbon sources along with putative products of n -hexane metabolism were also evaluated. This report highlights the great versatility of Rhodococcus sp. strain BCP1 and defines for the first time the alkB gene transcriptional start site and the alkB promoter-inducing capacities for substrates different from n -alkanes in a Rhodococcus strain.

Country
Italy
Keywords

DNA, Bacterial, Molecular Sequence Data, Gene Expression, Sequence Analysis, DNA, beta-Galactosidase, Carbon, Artificial Gene Fusion, ALKB GENE; ALKANE MONOOXYGENASE; N-ALKANES; RHODOCOCCUS, Bacterial Proteins, Genes, Bacterial, Genes, Reporter, Multigene Family, Alkanes, Rhodococcus, Transcription Initiation Site, Energy Metabolism, Promoter Regions, Genetic, Plasmids

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
50
Top 10%
Top 10%
Top 10%
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