
pmid: 33446556
Natural language predicts viral escape Viral mutations that evade neutralizing antibodies, an occurrence known as viral escape, can occur and may impede the development of vaccines. To predict which mutations may lead to viral escape, Hie et al. used a machine learning technique for natural language processing with two components: grammar (or syntax) and meaning (or semantics) (see the Perspective by Kim and Przytycka). Three different unsupervised language models were constructed for influenza A hemagglutinin, HIV-1 envelope glycoprotein, and severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spike glycoprotein. Semantic landscapes for these viruses predicted viral escape mutations that produce sequences that are syntactically and/or grammatically correct but effectively different in semantics and thus able to evade the immune system. Science , this issue p. 284 ; see also p. 233
Acquired Immunodeficiency Syndrome, Multidisciplinary, Binding Sites, SARS-CoV-2, env Gene Products, Human Immunodeficiency Virus, COVID-19, Hemagglutinin Glycoproteins, Influenza Virus, Evolution, Molecular, Protein Domains, Influenza A virus, Influenza, Human, Mutation, Spike Glycoprotein, Coronavirus, HIV-1, Humans
Acquired Immunodeficiency Syndrome, Multidisciplinary, Binding Sites, SARS-CoV-2, env Gene Products, Human Immunodeficiency Virus, COVID-19, Hemagglutinin Glycoproteins, Influenza Virus, Evolution, Molecular, Protein Domains, Influenza A virus, Influenza, Human, Mutation, Spike Glycoprotein, Coronavirus, HIV-1, Humans
| selected citations These citations are derived from selected sources. This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 312 | |
| popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Top 0.1% | |
| influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Top 1% | |
| impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Top 0.1% |
