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Science
Article . 2016
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Network of epistatic interactions within a yeast snoRNA

Authors: Puchta, O.; Cseke, B.; Czaja, H.; Tollervey, D.; Sanguinetti, G.; Kudla, G.;

Network of epistatic interactions within a yeast snoRNA

Abstract

Epistasis and mutational fitness landscapeA fitness landscape of a gene defines the molecular potential of evolution. This can help us understand the current state of evolution as well as predict unrealized potential. Using deep sequencing to examine mutations in nonessential genes that affect the growth of yeast strains, two studies have generated fitness landscapes and measured the effect of epistatic interactions (see the Perspective by He and Liu). Liet al.generated a library of mutants in a transfer RNA gene, including all single and many double and multiple mutants. The RNA secondary structure was generally predictive of bases under selection. Similarly, Puchtaet al.assessed a small nucleolar RNA gene for the fitness effects of individual mutations, which correlated with evolutionary conservation and structural stability. Both studies suggest that epistasis—the combined functional effect—for double substitutions is more often negative than positive.Science, this issue pp.837and840; see also p.769

Countries
United Kingdom, Italy
Keywords

RNA Folding, Genes, Fungal, Genetic Variation, Epistasis, Genetic, Saccharomyces cerevisiae, Evolution, Molecular, Mutagenesis, Gene Expression Regulation, Fungal, Mutation, RNA, Small Nucleolar, Thermodynamics, Gene Regulatory Networks

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    popularity
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    Top 1%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
109
Top 1%
Top 10%
Top 1%
Green
bronze