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Article . 2008 . Peer-reviewed
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Article . 2008
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Surface Sites for Engineering Allosteric Control in Proteins

Authors: Jeeyeon, Lee; Madhusudan, Natarajan; Vishal C, Nashine; Michael, Socolich; Tina, Vo; William P, Russ; Stephen J, Benkovic; +1 Authors

Surface Sites for Engineering Allosteric Control in Proteins

Abstract

Statistical analyses of protein families reveal networks of coevolving amino acids that functionally link distantly positioned functional surfaces. Such linkages suggest a concept for engineering allosteric control into proteins: The intramolecular networks of two proteins could be joined across their surface sites such that the activity of one protein might control the activity of the other. We tested this idea by creating PAS-DHFR, a designed chimeric protein that connects a light-sensing signaling domain from a plant member of the Per/Arnt/Sim (PAS) family of proteins with Escherichia coli dihydrofolate reductase (DHFR). With no optimization, PAS-DHFR exhibited light-dependent catalytic activity that depended on the site of connection and on known signaling mechanisms in both proteins. PAS-DHFR serves as a proof of concept for engineering regulatory activities into proteins through interface design at conserved allosteric sites.

Keywords

Models, Molecular, Binding Sites, Flavoproteins, Light, Protein Conformation, Recombinant Fusion Proteins, Ligands, Protein Engineering, Catalysis, Protein Structure, Secondary, Protein Structure, Tertiary, Cryptochromes, Kinetics, Tetrahydrofolate Dehydrogenase, Allosteric Regulation, Escherichia coli, Allosteric Site, NADP

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    297
    popularity
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    Top 1%
    influence
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 1%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
297
Top 1%
Top 1%
Top 1%
bronze