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Molecular Plant Pathology
Article . 2024 . Peer-reviewed
License: CC BY
Data sources: Crossref
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PubMed Central
Article . 2024
License: CC BY
Data sources: PubMed Central
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Mining oomycete proteomes for phosphatome leads to the identification of specific expanded phosphatases in oomycetes

Authors: Min Qiu; Yaru Sun; Siqun Tu; Huaibo Li; Xin Yang; Haiyang Zhao; Maozhu Yin; +4 Authors

Mining oomycete proteomes for phosphatome leads to the identification of specific expanded phosphatases in oomycetes

Abstract

Abstract Phosphatases are important regulators of protein phosphorylation and various cellular processes, and they serve as counterparts to kinases. In this study, our comprehensive analysis of oomycete complete proteomes unveiled the presence of approximately 3833 phosphatases, with most species estimated to have between 100 and 300 putative phosphatases. Further investigation of these phosphatases revealed a significant increase in protein serine/threonine phosphatases (PSP) within oomycetes. In particular, we extensively studied the metallo‐dependent protein phosphatase (PPM) within the PSP family in the model oomycete Phytophthora sojae . Our results showed notable differences in the expression patterns of PPMs throughout 10 life stages of P. sojae , indicating their vital roles in various stages of oomycete pathogens. Moreover, we identified 29 PPMs in P. sojae , and eight of them possessed accessory domains in addition to phosphate domains. We investigated the biological function of one PPM protein with an extra PH domain (PPM1); this protein exhibited high expression levels in both asexual developmental and infectious stages. Our analysis confirmed that PPM1 is indeed an active protein phosphatase, and its accessory domain does not affect its phosphatase activity. To delve further into its function, we generated knockout mutants of PPM1 and validated its essential roles in mycelial growth, sporangia and oospore production, as well as infectious stages. To the best of our knowledge, this study provides the first comprehensive inventory of phosphatases in oomycetes and identifies an important phosphatase within the expanded serine/threonine phosphatase group in oomycetes.

Related Organizations
Keywords

Phytophthora, Proteome, Oomycetes, Phosphoprotein Phosphatases, Serine, Original Articles

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
3
Top 10%
Average
Average
Green
gold