The western capercaillie Tetrao urogallus , hereafter capercaillie, is the largest galliform bird present in the boreal and montane forests of the Western Palearctic. Precise and accurate methods for estimating the number of individuals and/or their densities are crucial for the proper management of its free‐ranging populations. However, obtaining reliable estimates of the abundance of populations of wild species and, particularly, of birds is not a simple task. In the case of lek‐mating birds such as capercaillie, surveys are traditionally based on lek counts, that is, counts of calling males present in their mating areas: the leks. This study was carried out on the Pyrenees at six capercaillie leks where two different lek counting approaches were performed: hide‐based and walk‐based. The results were compared with those obtained from an estimate of minimum population size (MPE) derived from genotyping all faeces samples found in the lek area, and with a population size estimate derived from a genetic mark‐recapture model () of each capercaillie lek. The results of were used to estimate the detection rate ( D ) of both lek count approaches. Our results show that traditional lek counts do not detect all male capercaillies since the detection rate was 0.34 (95% CI: 0.26–0.43) for hide‐ and 0.56 (95% CI: 0.43–0.68) for walk‐based lek counts. Our results suggest that the walk‐based lek counts were more efficient than the hide‐based ones, providing more accurate results compared to the estimate. The combination of non‐invasive sampling with genetic mark‐recapture model was found to be the most reliable method for obtaining the of leks given that traditional lek counts underestimate the number of capercaillie and, furthermore, can cause disturbance to the species at these sites.