In case of dryings, the hyporheic zone is one of the most important refugia for stream macroinvertebrate communities, including the few Odonata species living in these habitats, such as Cordulegaster species. There is no information on the desiccation resistance strategies and methods of any members of the genus, including Cordulegaster heros . We hypothesised that the larvae use burrowing behaviour to survive droughts. In this study, beyond recording the survival rates of the larvae, we tested the effects of the sediment particle size and the body size of the larvae on burrowing behaviour in a 3‐week‐long simulated drought experiment in an indoor artificial stream system. Eighty larvae were involved in the experiment, from which 60 were treated with drought, and 20 served as controls. Larvae were put into flowing water, into separate special compartments; 1 day later, the flow was ceased, and then, the water level was gradually decreased for 3 weeks. Approximately 15% of larvae could survive the 3 weeks of drying. The survival probability of drought‐treated larvae was significantly increased if animals burrowed into the sediment. In addition, the survival probability was higher in case of fine substrate material. Size of the larvae only affected the depth of the burrowing, not the survival rate. However, two‐thirds of the larvae did not dig into the sediment, which implies that surviving via burrowing is not the only mechanism of the species to withstand dry periods.