From the logistics service extension to the logistics finance business, and gradually formed logistics finance information system. This paper discusses the related concepts of logistics finance, on the basis of analysis of the market status, put forward the logistics finance business is the urgent demand of the development of modern logistics. Study on the difficulties in the development of logistics finance information system, including function scale, demand analysis, system construction and business process reengineering equilibrium problem, interface problem of logistics finance information system. Focus on the construction of basic method and process, must consider the characteristics of basic framework, system structure of logistics finance information system. Logistics finance information system structure includes the strategy and development subsystem, information management subsystem, system settings subsystem, operation management subsystem, business management subsystem, related business subsystem, business supervision subsystem, finance management subsystem, risk management subsystem, decision-making analysis subsystem. Enterprises through the help of logistics finance business information system, consolidate the old customer relationship, open up new service market, become business and profit a new growth point. Finally summarizes the problem of logistics finance information system and the direction of further development.