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GroupAdaBoost for Selecting Important Genes

Authors: Takashi Takenouchi; Masaru Ushijima; Shinto Eguchi;

GroupAdaBoost for Selecting Important Genes

Abstract

This paper proposes GroupAdaBoost as a variant of AdaBoost for statistical pattern recognition. The objective of the proposed algorithm is to solve the p /spl Gt/ n problem arisen in bioinformatics. Typically, p is the number of investigated genes and n is number of individuals in a microarray experiment for observing gene expressions in a problem to extract any speci c pattern of gene expressions related to a disease status. The ordinary method for predicting the genetic causes of diseases is apt to over-learn from any particular training dataset because of facing p /spl Gt/ n problem. We observed that GroupAdaBoost gave a robust performance for cases of the excess number of genes. In several real datasets, which are publicly available from Web-pages, we compared the analysis of results among the proposed method and others, and a small scale of simulation study to confirm the validity of the proposed method.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
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