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Viral quasi-species and recombination

Viral quasi-species and recombination

Abstract

Virus populations are complex ensembles of distinct but related genomes (so called quasi-species). Mathematical descriptions of viral quasi-species focus on point mutations as the principal source of variation. However, retroviruses (and many other viruses) are able to recombine their genomes. We study a mathematical model of viral quasi-species dynamics which incorporates both point mutation and recombination. We show that for low mutation rates recombination can reduce the diversity of the quasi-species and enhance overall fitness. For high mutation rates, however, recombination can push the quasi-species over the error threshold, and thereby cause a loss of all genetic information. Finally, recombination introduces bistability to the quasi-species; if the frequency of an advantageous mutant is below a certain threshold, it will not be selected.

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
84
Top 10%
Top 10%
Average
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