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Nucleic Acids Research
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Nucleic Acids Research
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The Pfam protein families database

descriptionPublicationkeyboard_double_arrow_right Article 23 Dec 2007 English Publisher:Oxford University Press (OUP)Journal:Nucleic Acids Research, volume 36, pages D281-D288 (issn: 0305-1048, eissn: 1362-4962, Copyright policy )Funded by:WT | unidentified, UKRI | Co-ordination, integratio...
Authors: Robert D. Finn; John G. Tate; Jaina Mistry; Penny C. Coggill; Stephen John Sammut; Hans-Rudolf Hotz; Goran Ceric; +4 Authors

doi: 10.1093/nar/gkm960

pmid: 18039703

pmc: PMC2238907

The Pfam protein families database

Abstract

Pfam is a comprehensive collection of protein domains and families, represented as multiple sequence alignments and as profile hidden Markov models. The current release of Pfam (22.0) contains 9318 protein families. Pfam is now based not only on the UniProtKB sequence database, but also on NCBI GenPept and on sequences from selected metagenomics projects. Pfam is available on the web from the consortium members using a new, consistent and improved website design in the UK (http://pfam.sanger.ac.uk/), the USA (http://pfam.janelia.org/) and Sweden (http://pfam.sbc.su.se/), as well as from mirror sites in France (http://pfam.jouy.inra.fr/) and South Korea (http://pfam.ccbb.re.kr/).

Related Organizations
Keywords

Internet, Proteins, Articles, Genomics, Protein Structure, Tertiary, User-Computer Interface, Cardiovascular and Metabolic Diseases, Sequence Analysis, Protein, Animals, Databases, Protein, Sequence Alignment

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2K
Top 0.01%
Top 0.01%
Top 0.01%
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