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The Caenorhabditis elegans T20H4.4 open reading frame (GenBank accession no. U00037) predicted by Genefinder encodes a 367 amino acid protein that is 32-35% identical to the C-terminal domain of adenosine deaminases that act on RNA. We show that T20H4.4 cDNAs (GenBank accession no. AF051275) encode a larger 495 amino acid protein that is extended at its N-terminus to include a single double-stranded RNA-binding motif, and that T20H4.4 occupies the second position in a six-gene operon (5'-T20H4.5, T20H4.4, R151.8A, R151.8B, R151.7, R151.6-3'). Ten different spliced-leader (SL) sequences were found attached to T20H4.4 mRNAs, including SL1, SL2 and eight SL2-like leaders that include two new variants. Characterization of cDNAs derived from all six genes confirmed the essential features of C.elegans operons: intercistronic distances in the range of 104-257 nt between the upstream polyadenylation sites and the downstream trans -splice sites; SL2, or SL2-like leaders, attached to the downstream mRNAs. Polycistronic mRNA fragments revealed a 5'-untranslated region (5'-UTR) >705 nt. The 5'-UTR is removed in mature mRNAs from the first gene (T20H4.5) and replaced primarily by SL1, and to a lesser extent by SL2. Our study provides new information regarding operons and how they are processed.
DNA, Complementary, Base Sequence, Models, Genetic, Sequence Homology, Amino Acid, Transcription, Genetic, Adenosine Deaminase, Molecular Sequence Data, Trans-Splicing, Open Reading Frames, Multigene Family, Protein Biosynthesis, Operon, Animals, Amino Acid Sequence, RNA, Messenger, 5' Untranslated Regions, Caenorhabditis elegans
DNA, Complementary, Base Sequence, Models, Genetic, Sequence Homology, Amino Acid, Transcription, Genetic, Adenosine Deaminase, Molecular Sequence Data, Trans-Splicing, Open Reading Frames, Multigene Family, Protein Biosynthesis, Operon, Animals, Amino Acid Sequence, RNA, Messenger, 5' Untranslated Regions, Caenorhabditis elegans
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 27 | |
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influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Top 10% | |
impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Top 10% |