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The Journal of Biochemistry
Article . 2019 . Peer-reviewed
License: OUP Standard Publication Reuse
Data sources: Crossref
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Role of the N-terminus in human 4-hydroxyphenylpyruvate dioxygenase activity

Authors: An-Ning, Feng; Chih-Wei, Huang; Chi-Huei, Lin; Yung-Lung, Chang; Meng-Yuan, Ni; Hwei-Jen, Lee;

Role of the N-terminus in human 4-hydroxyphenylpyruvate dioxygenase activity

Abstract

Abstract4-Hydroxyphenylpyruvate dioxygenase (HPPD) is a key enzyme in tyrosine catabolism, catalysing the oxidation of 4-hydroxyphenylpyruvate to homogentisate. Genetic deficiency of this enzyme causes type III tyrosinaemia. The enzyme comprises two barrel-shaped domains formed by the N- and C-termini, with the active site located in the C-terminus. This study investigated the role of the N-terminus, located at the domain interface, in HPPD activity. We observed that the kcat/Km decreased ∼8-fold compared with wild type upon removal of the 12 N-terminal residues (ΔR13). Interestingly, the wild-type level of activity was retained in a mutant missing the 17 N-terminal residues, with a kcat/Km 11-fold higher than that of the ΔR13 mutant; however, the structural stability of this mutant was lower than that of wild type. A 2-fold decrease in catalytic efficiency was observed for the K10A and E12A mutants, indicating synergism between these residues in the enzyme catalytic function. A molecular dynamics simulation showed large RMS fluctuations in ΔR13 suggesting that conformational flexibility at the domain interface leads to lower activity in this mutant. These results demonstrate that the N-terminus maintains the stability of the domain interface to allow for catalysis at the active site of HPPD.

Keywords

Models, Molecular, Phenylpyruvic Acids, Protein Conformation, Circular Dichroism, Hydrogen Bonding, Molecular Dynamics Simulation, 4-Hydroxyphenylpyruvate Dioxygenase, Catalysis, Kinetics, Protein Domains, Catalytic Domain, Mutation, Humans, Tyrosine, Hydrophobic and Hydrophilic Interactions

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    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
4
Top 10%
Average
Average
hybrid