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Bioinformatics
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Bioinformatics
Article . 2019
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TabPath: interactive tables for metabolic pathway analysis

Authors: Lauro Ângelo Gonçalves de Moraes; Érica Barbosa Felestrino; Renata de Almeida Barbosa Assis; Diogo Matos; Joubert de Castro Lima; Leandro de Araújo Lima; Nalvo F. de Almeida Jr.; +3 Authors

TabPath: interactive tables for metabolic pathway analysis

Abstract

Abstract Motivation Information about metabolic pathways in a comparative context is one of the most powerful tool to help the understanding of genome-based differences in phenotypes among organisms. Although several platforms exist that provide a wealth of information on metabolic pathways of diverse organisms, the comparison among organisms using metabolic pathways is still a difficult task. Results We present TabPath (Tables for Metabolic Pathway), a web-based tool to facilitate comparison of metabolic pathways in genomes based on KEGG. From a selection of pathways and genomes of interest on the menu, TabPath generates user-friendly tables that facilitate analysis of variations in metabolism among the selected organisms. Availability and implementation TabPath is available at http://200.239.132.160:8686.

Keywords

Genome, Metabolic Networks and Pathways

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    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2
Average
Average
Average
gold