MACAT--microarray chromosome analysis tool
Copyright policy )MACAT--microarray chromosome analysis tool
By linking differential gene expression to the chromosomal localization of genes, one can investigate microarray data for characteristic patterns of expression phenomena involving sizeable parts of specific chromosomes. We have implemented a statistical approach for identifying significantly differentially expressed chromosome regions. We demonstrate the applicability of the approach on a publicly available data set on acute lymphocytic leukemia.The R-package MACAT can be obtained from http://www.compdiag.molgen.mpg.de/software/macat.shtmlhttp://www.compdiag.molgen.mpg.de/software/macat.shtml.
- Max Planck Society Germany
- Freie Universität Berlin Germany
- Max Planck Institute for Molecular Genetics Germany
Models, Statistical, Gene Frequency, Models, Genetic, Gene Expression Profiling, Chromosome Mapping, Computer Simulation, Algorithms, Linkage Disequilibrium, Software, Oligonucleotide Array Sequence Analysis
Models, Statistical, Gene Frequency, Models, Genetic, Gene Expression Profiling, Chromosome Mapping, Computer Simulation, Algorithms, Linkage Disequilibrium, Software, Oligonucleotide Array Sequence Analysis
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