SNPP: automating large-scale SNP genotype data management
Copyright policy )SNPP: automating large-scale SNP genotype data management
Abstract Summary: To manage high-throughput single nucleotide polymorphism (SNP) genotyping data efficiently, we developed a dynamic general database management system—SNPP (SNP Processor). It provides several functions, including data importing with comparison, Mendelian inheritance check within pedigrees, data compiling and exporting. Furthermore, SNPP may generate files for repeat genotyping and transform them into files that can be executed by a liquid handling system. Availability: http://orclinux.creighton.edu/snpp/ Contact: lanjuanzhao@creighton.edu
- University of Hong Kong China (People's Republic of)
- Hunan Normal University China (People's Republic of)
- University of Hong Kong (香港大學) China (People's Republic of)
- Creighton University United States
- Yale University United States
Internet, Nucleic Acid, Genotype, Chromosome Mapping, Information Storage and Retrieval, Sequence Analysis, Dna - Methods, Linkage Disequilibrium - Genetics, Sequence Analysis, DNA, Linkage Disequilibrium, Databases, User-Computer Interface, Chromosome Mapping - Methods, Sequence Alignment - Methods, Information Storage And Retrieval - Methods, Database Management Systems, Dna - Methods, Databases, Nucleic Acid, Sequence Analysis, Sequence Alignment, Algorithms, Software
Internet, Nucleic Acid, Genotype, Chromosome Mapping, Information Storage and Retrieval, Sequence Analysis, Dna - Methods, Linkage Disequilibrium - Genetics, Sequence Analysis, DNA, Linkage Disequilibrium, Databases, User-Computer Interface, Chromosome Mapping - Methods, Sequence Alignment - Methods, Information Storage And Retrieval - Methods, Database Management Systems, Dna - Methods, Databases, Nucleic Acid, Sequence Analysis, Sequence Alignment, Algorithms, Software
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