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Bioinformatics
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Bioinformatics
Article . 1997 . Peer-reviewed
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DBLP
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DSC: public domain protein secondary structure prediction

Authors: Ross D. King; Mansoor A. S. Saqi; Roger A. Sayle; Michael J. E. Sternberg;

DSC: public domain protein secondary structure prediction

Abstract

1. DSC has high accuracy. It has a prediction accuracy of 70.1% (per residue) on a standard set of 126 proteins. This percentage was confirmed by the recent CASP2 blind prediction challenge (see below). 2. DSC is based on simple linear statistics. Existing highaccuracy prediction methods are 'black-box' predictors based on complex non-linear statistics [e.g. neural networks in PHD (Rost and Sander, 1993) and nearestneighbour methods in NNSSP (Salamov and Solovyev, 1995)]. 3. DSC's accuracy is predictable a priori. This permits evaluation of the utility of the prediction, e.g. it is possible accurately to predict chains that have a mean accuracy of >80%. 4. DSC source code is freely available (in C). This allows DSC to be easily ported to other systems and to be used on proprietary sequences (e.g. DSC is running in-house at Glaxo Welcome pic). 5. DSC has a prediction server (see below). This server can generate its own sequence alignments.

Country
United Kingdom
Related Organizations
Keywords

Computer Communication Networks, Biometry, Molecular Structure, Evaluation Studies as Topic, Linear Models, Proteins, Amino Acid Sequence, Sequence Alignment, Protein Structure, Secondary, Software

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    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
51
Top 10%
Top 10%
Top 10%
bronze