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ABSTRACTWe examined the extracellular vesicle (EV) and RNA composition of pooled normal cerebrospinal fluid (CSF) samples and CSF from five major neurological disorders: Alzheimer's disease (AD), Parkinson's disease (PD), low‐grade glioma (LGG), glioblastoma multiforme (GBM), and subarachnoid haemorrhage (SAH), representing neurodegenerative disease, cancer, and severe acute brain injury. We evaluated: (I) size and quantity of EVs by nanoparticle tracking analysis (NTA) and vesicle flow cytometry (VFC), (II) RNA yield and purity using four RNA isolation kits, (III) replication of RNA yields within and between laboratories, and (IV) composition of total and EV RNAs by reverse transcription–quantitative polymerase chain reaction (RT‐qPCR) and RNA sequencing (RNASeq). The CSF contained ~106 EVs/μL by NTA and VFC. Brain tumour and SAH CSF contained more EVs and RNA relative to normal, AD, and PD. RT‐qPCR and RNASeq identified disease‐related populations of microRNAs and messenger RNAs (mRNAs) relative to normal CSF, in both total and EV fractions. This work presents relevant measures selected to inform the design of subsequent replicative CSF studies. The range of neurological diseases highlights variations in total and EV RNA content due to disease or collection site, revealing critical considerations guiding the selection of appropriate approaches and controls for CSF studies.
610, Neurodegenerative, cerebrospinal fluid, Rare Diseases, Genetics, Acquired Cognitive Impairment, 2.1 Biological and endogenous factors, Aetiology, Cancer, QH573-671, Neurosciences, Extracellular vesicles, extracellular RNA, Brain Disorders, Brain Cancer, Neurological, Dementia, Biochemistry and Cell Biology, Transferred Article, Cytology, neurological diseases, Biotechnology
610, Neurodegenerative, cerebrospinal fluid, Rare Diseases, Genetics, Acquired Cognitive Impairment, 2.1 Biological and endogenous factors, Aetiology, Cancer, QH573-671, Neurosciences, Extracellular vesicles, extracellular RNA, Brain Disorders, Brain Cancer, Neurological, Dementia, Biochemistry and Cell Biology, Transferred Article, Cytology, neurological diseases, Biotechnology
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 82 | |
popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Top 1% | |
influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Top 10% | |
impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Top 10% |