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Large-scale simulations of fluctuating biological membranes

Authors: Maibaum, Lutz; Pasqua, Andrea; Oster, George; Fletcher, Daniel A.; Geissler, Phillip L.;

Large-scale simulations of fluctuating biological membranes

Abstract

We present a simple, and physically motivated, coarse-grained model of a lipid bilayer, suited for micron scale computer simulations. Each ≈25 nm2 patch of bilayer is represented by a spherical particle. Mimicking forces of hydrophobic association, multiparticle interactions suppress the exposure of each sphere’s equator to its implicit solvent surroundings. The requirement of high equatorial density stabilizes two-dimensional structures without necessitating crystalline order, allowing us to match both the elasticity and fluidity of natural lipid membranes. We illustrate the model’s versatility and realism by characterizing a membrane’s response to a prodding nanorod.

Keywords

Nanotubes, Statistical Mechanics (cond-mat.stat-mech), Lipid Bilayers, Biophysics, FOS: Physical sciences, Membranes, Artificial, Condensed Matter - Soft Condensed Matter, Elasticity, Soft Condensed Matter (cond-mat.soft), Computer Simulation, Particle Size, Hydrophobic and Hydrophilic Interactions, Condensed Matter - Statistical Mechanics, Algorithms

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    11
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Average
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
11
Average
Average
Average
Green
hybrid