
doi: 10.1038/nsmb898
pmid: 15696175
ATP-dependent protein degradation is controlled principally by substrate recognition. The AAA+ HslU ATPase is thought to bind protein substrates, denature them, and translocate the unfolded polypeptide into the HslV peptidase. The lack of well-behaved high-affinity substrates for HslUV (ClpYQ) has hampered understanding of the rules and mechanism of substrate engagement. We show that HslUV efficiently degrades Arc repressor, especially at heat-shock temperatures. Degradation depends on sequences near the N terminus of Arc. Fusion protein and peptide-binding experiments demonstrate that this sequence is a degradation tag that binds directly to HslU. Strong binding of this tag to the enzyme requires ATP and Mg(2+). Furthermore, fusion of this sequence to a protein with marked mechanical stability leads to complete degradation. Thus, these experiments demonstrate that HslUV is a powerful protein unfoldase and that initial substrate engagement by the HslU ATPase must occur after ATP binding.
Adenosine Triphosphatases, Protein Denaturation, Protein Folding, Binding Sites, Escherichia coli Proteins, Recombinant Fusion Proteins, Endopeptidase Clp, Substrate Specificity, Repressor Proteins, Viral Proteins, Adenosine Triphosphate, Protein Interaction Mapping, Magnesium, Viral Regulatory and Accessory Proteins, Heat-Shock Proteins
Adenosine Triphosphatases, Protein Denaturation, Protein Folding, Binding Sites, Escherichia coli Proteins, Recombinant Fusion Proteins, Endopeptidase Clp, Substrate Specificity, Repressor Proteins, Viral Proteins, Adenosine Triphosphate, Protein Interaction Mapping, Magnesium, Viral Regulatory and Accessory Proteins, Heat-Shock Proteins
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