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image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Nature Structural & ...arrow_drop_down
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
Nature Structural & Molecular Biology
Article . 2006 . Peer-reviewed
License: Springer TDM
Data sources: Crossref
MPG.PuRe
Article . 2006
Data sources: MPG.PuRe
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Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

Authors: Listerman, I.; Sapra, A.; Neugebauer, K.;

Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells

Abstract

Coupling between transcription and RNA processing is a key gene regulatory mechanism. Here we use chromatin immunoprecipitation to detect transcription-dependent accumulation of the precursor mRNA (pre-mRNA) splicing factors hnRNP A1, U2AF65 and U1 and U5 snRNPs on the intron-containing human FOS gene. These factors were poorly detected on intronless heat-shock and histone genes, a result that opposes direct recruitment by RNA polymerase II (Pol II) or the cap-binding complex in vivo. However, an observed RNA-dependent interaction between U2AF65 and active forms of Pol II may stabilize U2AF65 binding to intron-containing nascent RNA. We establish chromatin-RNA immunoprecipitation and show that FOS pre-mRNA is cotranscriptionally spliced. Notably, the topoisomerase I inhibitor camptothecin, which stalls elongating Pol II, increased cotranscriptional splicing factor accumulation and splicing in parallel. This provides direct evidence for a kinetic link between transcription, splicing factor recruitment and splicing catalysis.

Keywords

Chromatin Immunoprecipitation, Transcription, Genetic, Heterogeneous Nuclear Ribonucleoprotein A1, RNA Splicing, Introns, Gene Expression Regulation, RNA Cap-Binding Proteins, Heterogeneous-Nuclear Ribonucleoprotein Group A-B, RNA Precursors, Tumor Cells, Cultured, Humans, Camptothecin, HSP70 Heat-Shock Proteins, RNA Polymerase II, Proto-Oncogene Proteins c-fos

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
271
Top 1%
Top 1%
Top 1%
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