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Dynamics of BAF–Polycomb complex opposition on heterochromatin in normal and oncogenic states

Authors: Cigall Kadoch; Robert T Williams; Joseph P Calarco; Erik L Miller; Christopher M Weber; Simon M G Braun; John L Pulice; +2 Authors

Dynamics of BAF–Polycomb complex opposition on heterochromatin in normal and oncogenic states

Abstract

The opposition between Polycomb repressive complexes (PRCs) and BAF (mSWI/SNF) complexes has a critical role in both development and disease. Mutations in the genes encoding BAF subunits contribute to more than 20% of human malignancies, yet the underlying mechanisms remain unclear, owing largely to a lack of assays to assess BAF function in living cells. To address this, we have developed a widely applicable recruitment assay system through which we find that BAF opposes PRC by rapid, ATP-dependent eviction, leading to the formation of accessible chromatin. The reversal of this process results in reassembly of facultative heterochromatin. Surprisingly, BAF-mediated PRC eviction occurs in the absence of RNA polymerase II (Pol II) occupancy, transcription, and replication. Further, we find that tumor-suppressor and oncogenic mutant BAF complexes have different effects on PRC eviction. The results of these studies define a mechanistic sequence underlying the resolution and formation of facultative heterochromatin, and they demonstrate that BAF opposes PRC on a minute-by-minute basis to provide epigenetic plasticity.

Countries
United States, Switzerland
Keywords

DNA Replication, 570, DNA Replication/genetics, Mutation/genetics, Transcription, Genetic, Carcinogenesis, Polycomb-Group Proteins, RNA Polymerase II/genetics, Article, Epigenesis, Genetic, Heterochromatin, Polycomb-Group Proteins/genetics, Humans, Genetic/genetics, Chromatin/genetics, Nuclear Proteins, Heterochromatin/genetics, Chromatin, Nuclear Proteins/genetics, DNA-Binding Proteins, Mutation, Carcinogenesis/genetics, RNA Polymerase II, Transcription, DNA-Binding Proteins/genetics, Epigenesis

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    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    265
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 1%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 10%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 1%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
265
Top 1%
Top 10%
Top 1%
Green
hybrid