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Nature
Article
Data sources: UnpayWall
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Nature
Article . 2002 . Peer-reviewed
License: Springer TDM
Data sources: Crossref
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Article . 2002
Data sources: HAL INRAE
Nature
Article . 2002
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Genome sequence of the plant pathogen Ralstonia solanacearum

Authors: Salanoubat, Marcel; Genin, S.; Artiguenave, François; Gouzy, J.; Mangenot, S.; Arlat, M.; Billault, A.; +21 Authors

Genome sequence of the plant pathogen Ralstonia solanacearum

Abstract

Ralstonia solanacearum is a devastating, soil-borne plant pathogen with a global distribution and an unusually wide host range. It is a model system for the dissection of molecular determinants governing pathogenicity. We present here the complete genome sequence and its analysis of strain GMI1000. The 5.8-megabase (Mb) genome is organized into two replicons: a 3.7-Mb chromosome and a 2.1-Mb megaplasmid. Both replicons have a mosaic structure providing evidence for the acquisition of genes through horizontal gene transfer. Regions containing genetically mobile elements associated with the percentage of G+C bias may have an important function in genome evolution. The genome encodes many proteins potentially associated with a role in pathogenicity. In particular, many putative attachment factors were identified. The complete repertoire of type III secreted effector proteins can be studied. Over 40 candidates were identified. Comparison with other genomes suggests that bacterial plant pathogens and animal pathogens harbour distinct arrays of specialized type III-dependent effectors.

Country
France
Keywords

570, Molecular Sequence Data, MESH: Gram-Negative Aerobic Rods and Cocci, MESH: Biological Evolution, MESH: Virulence, MESH: Sequence Analysis, RALSTONIA SOLANACEARUM, Bacterial Proteins, Solanum lycopersicum, MESH: Lycopersicon esculentum, MESH: Genome, MESH: Bacterial Proteins, [INFO.INFO-BI] Computer Science [cs]/Bioinformatics [q-bio.QM], MESH: Molecular Sequence Data, [SDV.BIBS] Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Virulence, MESH: Genomics, Bacterial, DNA, Genomics, Sequence Analysis, DNA, [SDV.BIBS]Life Sciences [q-bio]/Quantitative Methods [q-bio.QM], Biological Evolution, Gram-Negative Aerobic Rods and Cocci, [INFO.INFO-BI]Computer Science [cs]/Bioinformatics [q-bio.QM], Genome, Bacterial

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
849
Top 0.1%
Top 0.1%
Top 0.1%
bronze