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image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao https://doi.org/10.1...arrow_drop_down
image/svg+xml Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao Closed Access logo, derived from PLoS Open Access logo. This version with transparent background. http://commons.wikimedia.org/wiki/File:Closed_Access_logo_transparent.svg Jakob Voss, based on art designer at PLoS, modified by Wikipedia users Nina and Beao
https://doi.org/10.1017/cbo978...
Part of book or chapter of book . 2007 . Peer-reviewed
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Molecular dynamics simulations

Authors: Jos Thijssen;

Molecular dynamics simulations

Abstract

Introduction In the previous chapter we saw that the experimental values of physical quantities of a many-particle system can be found as an ensemble average. Experimental systems are so large that it is impossible to determine this ensemble average by summing over all the accessible states in a computer. There exist essentially two methods for determining these physical quantities as statistical averages over a restricted set of states: the molecular dynamics and Monte Carlo methods. Imagine that we have a random sample of, say, 10 7 configurations of the system which are all compatible with the values of the system parameters. For such a large number we expect averages of physical quantities over the sample to be rather close to the ensemble average. It is unfortunately impossible to generate such a random sample; however, we can generate a sample consisting of a large number of configurations which are determined successively from each other and are hence correlated. This is done in the molecular dynamics and Monte Carlo methods. The latter will be described in Chapter 10. Molecular dynamics is a widely used method for studying classical many-particle systems. It consists essentially of integrating the equations of motion of the system numerically. It can therefore be viewed as a simulation of the system as it develops over a period of time. The system moves in phase space along its physical trajectory as determined by the equations of motion, whereas in the Monte Carlo method it follows a (directed) random walk.

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This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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