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Article
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Methods
Article . 2017 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
Methods
Article . 2018
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Characterization of aminoacyl-tRNA synthetase stability and substrate interaction by differential scanning fluorimetry

Authors: Jamie A, Abbott; Nathan M, Livingston; Shawn B, Egri; Ethan, Guth; Christopher S, Francklyn;

Characterization of aminoacyl-tRNA synthetase stability and substrate interaction by differential scanning fluorimetry

Abstract

Differential scanning fluorimetry (DSF) is a fluorescence-based assay to evaluate protein stability by determining protein melting temperatures. Here, we describe the application of DSF to investigate aminoacyl-tRNA synthetase (AARS) stability and interaction with ligands. Employing three bacterial AARS enzymes as model systems, methods are presented here for the use of DSF to measure the apparent temperatures at which AARSs undergo melting transitions, and the effect of AARS substrates and inhibitors. One important observation is that the extent of temperature stability realized by an AARS in response to a particular bound ligand cannot be predicted a priori. The DSF method thus serves as a rapid and highly quantitative approach to measure AARS stability, and the ability of ligands to influence the temperature at which unfolding transitions occur.

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Keywords

Escherichia coli Proteins, Alanine-tRNA Ligase, RNA, Transfer, Amino Acid-Specific, Phase Transition, Histidine-tRNA Ligase, Substrate Specificity, Enzyme Stability, Escherichia coli, Threonine-tRNA Ligase, Benzopyrans, Fluorometry, Muramidase, Transfer RNA Aminoacylation, Amino Acids, Enzyme Inhibitors, Fluorescent Dyes, Protein Binding, Protein Unfolding

  • BIP!
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    selected citations
    These citations are derived from selected sources.
    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    16
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Average
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
16
Top 10%
Average
Top 10%
bronze