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Methods
Article . 2013 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
Methods
Article . 2014
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Identification and RNA binding characterization of plant virus RNA silencing suppressor proteins

Authors: Vargason, Jeff; Burch, Carissa J.; Wilson, Jesse W.;

Identification and RNA binding characterization of plant virus RNA silencing suppressor proteins

Abstract

Suppression is a common mechanism employed by viruses to evade the antiviral effects of the host's RNA silencing pathway. The activity of suppression has commonly been localized to gene products in the virus, but the variety of mechanisms used in suppression by these viral proteins spans nearly the complete biochemical pathway of RNA silencing in the host. This review describes the agrofiltration assay and a slightly modified version of the agro-infiltration assay called co-infiltration, which are common methods used to observe RNA silencing and identify viral silencing suppressor proteins in plants, respectively. In addition, this review will provide an overview of two methods, electrophoretic mobility shift assay and fluorescence polarization, used to assess the binding of a suppressor protein to siRNA which has been shown to be a general mechanism to suppress RNA silencing by plant viruses.

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United States
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Keywords

Nicotiana, Co-infiltration, Agroinfiltration, Arabidopsis, Electrophoretic Mobility Shift Assay, Fluorescence Polarization, Cell Biology, Biochemistry, Plant Viruses, Fluorescence polarization, RNA, Plant, Electrophoretic mobility shift assay, RNA Interference, RNA silencing, RNA silencing suppression, Disease Resistance

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
2
Average
Average
Average
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