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Virology
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Virology
Article . 2004
License: Elsevier Non-Commercial
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Virology
Article . 2004 . Peer-reviewed
License: Elsevier Non-Commercial
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Virology
Article . 2004
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Immediate early genes expressed in chlorovirus infections

Authors: Kawasaki, Takeru; Tanaka, Masahiro; Fujie, Makoto; Usami, Shoji; Yamada, Takashi;

Immediate early genes expressed in chlorovirus infections

Abstract

Twenty-three chlorovirus genes expressed in host cells as early as 5-10 min postinfection (p.i.), or immediate early, were isolated and characterized. Some showed significant homology with those for transcriptional factors and mRNA-processing proteins including TFIIB, helicases, mRNA capping enzyme, nucleolin, and bean transcription factor. Others code for (i) factors influencing translation such as aminoacyl tRNA synthetases and ribosomal protein, and (ii) unknown proteins. Enzymes involved in polysaccharide synthesis were also found. All transcripts of these genes had a poly(A) tail, which decreased in size after 20 min p.i., possibly caused by the shortening by an exonuclease. Often, due to readthrough either from an upstream ORF or into a downstream ORF, a few extra transcripts for each gene appeared after 40 min p.i., suggesting a change in promoter selection and termination accuracy at this point. A typical TATA-box and a common element 5'-ATGACAA were in the promoter region of almost all of the immediate early genes, which may be recognized by host RNA polymerase and transcription factors.

Related Organizations
Keywords

Gene Expression Regulation, Viral, Base Sequence, Transcription, Genetic, Immediate early genes, Molecular Sequence Data, Chlorovirus, Chlorella, Translation factor, Immediate-Early Proteins, Poly(A) tail, Virology, Protein Biosynthesis, Promoter selection, Animals, Phycodnaviridae, Transcription factor, Cells, Cultured, Gene Library

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Average
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
22
Average
Top 10%
Top 10%
hybrid