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Procedia Computer Science
Article . 2017 . Peer-reviewed
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Procedia Computer Science
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Recolector de Ciencia Abierta, RECOLECTA
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Performance Analysis of Parallel Python Applications

Authors: Michael Wagner 0003; Germán Llort; Estanislao Mercadal; Judit Giménez; Jesús Labarta;

Performance Analysis of Parallel Python Applications

Abstract

Python is progressively consolidating itself within the HPC community with its simple syntax, large standard library, and powerful third-party libraries for scientific computing that are especially attractive to domain scientists. Despite Python lowering the bar for accessing parallel computing, utilizing the capacities of HPC systems efficiently remains a challenging task, after all. Yet, at the moment only few supporting tools exist and provide merely basic information in the form of summarized profile data. In this paper, we present our efforts in developing event-based tracing support for Python within the performance monitor Extrae to provide detailed information and enable a profound performance analysis. We present concepts to record the complete communication behavior as well as to capture entry and exit of functions in Python to provide the according application context. We evaluate our implementation in Extrae by analyzing the well-established electronic structure simulation package GPAW and demonstrate that the recorded traces provide equivalent information as for traditional C or Fortran applications and, therefore, offering the same profound analysis capabilities now for Python, as well.

Peer Reviewed

Country
Spain
Keywords

Parallel processing (Electronic computers), Paraver, Processament en paral·lel (Ordinadors), Performance analysis, Parallel, Tools, Tracing, Àrees temàtiques de la UPC::Informàtica::Arquitectura de computadors::Arquitectures paral·leles, High-level programming languages, HPC, Extrae, High performance computing, Càlcul intensiu (Informàtica), Python

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
views
OpenAIRE UsageCountsViews provided by UsageCounts
downloads
OpenAIRE UsageCountsDownloads provided by UsageCounts
19
Top 10%
Top 10%
Top 10%
80
65
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gold