
arXiv: cond-mat/0304326
handle: 11588/110863
It has been argued that the sum of usage probabilities for codons, belonging to quartets, that have as third nucleotide C or A, is independent of the biological species for vertebrates. The comparison between the theoretical correlation matrix derived from these sum rules and the experimentally computed matrix for 26 species shows a satisfactory agreement. The Shannon entropy, weakly depending on the biological species, gives further support. Suppression of codons containing the dinucleotides CG or AU is put in evidence.
570, Genome, [PHYS.PHYS.PHYS-BIO-PH]Physics [physics]/Physics [physics]/Biological Physics [physics.bio-ph], Entropy, Condensed Matter (cond-mat), FOS: Physical sciences, Condensed Matter, 530, Genome, Codon usage, Correlation, Information, Entropy, Correlation, Quantitative Biology, Biological Physics (physics.bio-ph), [PHYS.COND.CM-GEN]Physics [physics]/Condensed Matter [cond-mat]/Other [cond-mat.other], Information, FOS: Biological sciences, Codon usage, Physics - Biological Physics, Quantitative Biology (q-bio)
570, Genome, [PHYS.PHYS.PHYS-BIO-PH]Physics [physics]/Physics [physics]/Biological Physics [physics.bio-ph], Entropy, Condensed Matter (cond-mat), FOS: Physical sciences, Condensed Matter, 530, Genome, Codon usage, Correlation, Information, Entropy, Correlation, Quantitative Biology, Biological Physics (physics.bio-ph), [PHYS.COND.CM-GEN]Physics [physics]/Condensed Matter [cond-mat]/Other [cond-mat.other], Information, FOS: Biological sciences, Codon usage, Physics - Biological Physics, Quantitative Biology (q-bio)
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