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Physica A Statistical Mechanics and its Applications
Article . 2005 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
https://dx.doi.org/10.48550/ar...
Article . 2003
License: arXiv Non-Exclusive Distribution
Data sources: Datacite
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Correlation matrix for quartet codon usage

Authors: Frappat, L.; Sciarrino, A.; Sorba, P.;

Correlation matrix for quartet codon usage

Abstract

It has been argued that the sum of usage probabilities for codons, belonging to quartets, that have as third nucleotide C or A, is independent of the biological species for vertebrates. The comparison between the theoretical correlation matrix derived from these sum rules and the experimentally computed matrix for 26 species shows a satisfactory agreement. The Shannon entropy, weakly depending on the biological species, gives further support. Suppression of codons containing the dinucleotides CG or AU is put in evidence.

Countries
Italy, France, Italy
Keywords

570, Genome, [PHYS.PHYS.PHYS-BIO-PH]Physics [physics]/Physics [physics]/Biological Physics [physics.bio-ph], Entropy, Condensed Matter (cond-mat), FOS: Physical sciences, Condensed Matter, 530, Genome, Codon usage, Correlation, Information, Entropy, Correlation, Quantitative Biology, Biological Physics (physics.bio-ph), [PHYS.COND.CM-GEN]Physics [physics]/Condensed Matter [cond-mat]/Other [cond-mat.other], Information, FOS: Biological sciences, Codon usage, Physics - Biological Physics, Quantitative Biology (q-bio)

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
1
Average
Average
Average
Green
bronze