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Molecular Cell
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Molecular Cell
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Molecular Cell
Article . 2016
License: CC BY
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Molecular Structures of Transcribing RNA Polymerase I

Authors: Lucas Tafur; Yashar Sadian; Niklas A. Hoffmann; Arjen J. Jakobi; Rene Wetzel; Wim J.H. Hagen; Carsten Sachse; +1 Authors

Molecular Structures of Transcribing RNA Polymerase I

Abstract

RNA polymerase I (Pol I) is a 14-subunit enzyme that solely synthesizes pre-ribosomal RNA. Recently, the crystal structure of apo Pol I gave unprecedented insight into its molecular architecture. Here, we present three cryo-EM structures of elongating Pol I, two at 4.0 Å and one at 4.6 Å resolution, and a Pol I open complex at 3.8 Å resolution. Two modules in Pol I mediate the narrowing of the DNA-binding cleft by closing the clamp domain. The DNA is bound by the clamp head and by the protrusion domain, allowing visualization of the upstream and downstream DNA duplexes in one of the elongation complexes. During formation of the Pol I elongation complex, the bridge helix progressively folds, while the A12.2 C-terminal domain is displaced from the active site. Our results reveal the conformational changes associated with elongation complex formation and provide additional insight into the Pol I transcription cycle.

Keywords

Models, Molecular, Protein Conformation, alpha-Helical, Protein Folding, Binding Sites, Saccharomyces cerevisiae Proteins, Gene Expression, Cell Biology, DNA, Saccharomyces cerevisiae, Crystallography, X-Ray, Recombinant Proteins, Protein Structure, Tertiary, Protein Subunits, Short Article, RNA Polymerase I, RNA, Protein Interaction Domains and Motifs, Amino Acid Sequence, Protein Multimerization, Molecular Biology, Protein Binding

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    popularity
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    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
81
Top 10%
Top 10%
Top 1%
Green
hybrid