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Molecular Cell
Article
License: Elsevier Non-Commercial
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Molecular Cell
Article . 2011
License: Elsevier Non-Commercial
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Molecular Cell
Article . 2011 . Peer-reviewed
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Structural Basis of Atg8 Activation by a Homodimeric E1, Atg7

Authors: Noda, Nobuo N.; Satoo, Kenji; Fujioka, Yuko; Kumeta, Hiroyuki; Ogura, Kenji; Nakatogawa, Hitoshi; Ohsumi, Yoshinori; +1 Authors

Structural Basis of Atg8 Activation by a Homodimeric E1, Atg7

Abstract

E1 enzymes activate ubiquitin-like proteins and transfer them to cognate E2 enzymes. Atg7, a noncanonical E1, activates two ubiquitin-like proteins, Atg8 and Atg12, and plays a crucial role in autophagy. Here, we report crystal structures of full-length Atg7 and its C-terminal domain bound to Atg8 and MgATP, as well as a solution structure of Atg8 bound to the extreme C-terminal domain (ECTD) of Atg7. The unique N-terminal domain (NTD) of Atg7 is responsible for Atg3 (E2) binding, whereas its C-terminal domain is comprised of a homodimeric adenylation domain (AD) and ECTD. The structural and biochemical data demonstrate that Atg8 is initially recognized by the C-terminal tail of ECTD and is then transferred to an AD, where the Atg8 C terminus is attacked by the catalytic cysteine to form a thioester bond. Atg8 is then transferred via a trans mechanism to the Atg3 bound to the NTD of the opposite protomer within a dimer.

Keywords

Models, Molecular, Binding Sites, Saccharomyces cerevisiae Proteins, Time Factors, Protein Conformation, Recombinant Fusion Proteins, Autophagy-Related Proteins, Cell Biology, Autophagy-Related Protein 8 Family, Crystallography, X-Ray, Autophagy-Related Protein 7, Enzyme Activation, Structure-Activity Relationship, Adenosine Triphosphate, Multienzyme Complexes, Mutation, Protein Interaction Mapping, Ubiquitin-Conjugating Enzymes, Protein Interaction Domains and Motifs, Protein Multimerization, Molecular Biology, Microtubule-Associated Proteins

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    popularity
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
179
Top 1%
Top 10%
Top 1%
hybrid