
pmid: 15949442
After peptide release by a class-1 release factor, the ribosomal subunits must be recycled back to initiation. We have demonstrated that the distance between a strong Shine-Dalgarno (SD) sequence and a codon in the P site is crucial for the binding stability of the deacylated tRNA in the P site of the posttermination ribosome and the in-frame maintenance of its mRNA. We show that the elongation factor EF-G and the ribosomal recycling factor RRF split the ribosome into subunits in the absence of initiation factor 3 (IF3) by a mechanism that requires both GTP and GTP hydrolysis. Taking into account that EF-G in the GTP form and RRF bind with positive cooperativity to the free 50S subunit but with negative cooperativity to the 70S ribosome, we suggest a mechanism for ribosome recycling that specifies distinct roles for EF-G, RRF, and IF3.
Models, Molecular, Ribosomal Proteins, Base Sequence, Cell Biology, Peptide Elongation Factor G, Kinetics, RNA, Transfer, Protein Biosynthesis, Nucleic Acid Conformation, RNA, Messenger, Molecular Biology, Ribosomes
Models, Molecular, Ribosomal Proteins, Base Sequence, Cell Biology, Peptide Elongation Factor G, Kinetics, RNA, Transfer, Protein Biosynthesis, Nucleic Acid Conformation, RNA, Messenger, Molecular Biology, Ribosomes
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