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Journal of Molecular Biology
Article . 2015 . Peer-reviewed
License: Elsevier TDM
Data sources: Crossref
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Exon Skipping Is Correlated with Exon Circularization

Authors: Kelly, S; Greenman, C; Cook, PR; Papantonis, A;

Exon Skipping Is Correlated with Exon Circularization

Abstract

Circular RNAs are found in a wide range of organisms and it has been proposed that they perform disparate functions. However, how RNA circularization is connected to alternative splicing remains largely unexplored. Here, we stimulated primary human endothelial cells with tumor necrosis factor α or tumor growth factor β, purified RNA, generated >2.4 billion RNA-seq reads, and used a custom pipeline to characterize circular RNAs derived from coding exons. We find that circularization of exons is widespread and correlates with exon skipping, a feature that adds considerably to the regulatory complexity of the human transcriptome.

Keywords

Alternative Splicing, Transforming Growth Factor beta, Tumor Necrosis Factor-alpha, RNA Splicing, Human Umbilical Vein Endothelial Cells, Humans, RNA, Exons, RNA, Circular, Cells, Cultured

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    331
    popularity
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
331
Top 0.1%
Top 1%
Top 1%
Green