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Chemistry & Biology
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Chemistry & Biology
Article . 2008
License: Elsevier Non-Commercial
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Chemistry & Biology
Article . 2008 . Peer-reviewed
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A Universal Screening Assay for Glycosynthases: Directed Evolution of Glycosynthase XynB2(E335G) Suggests a General Path to Enhance Activity

Authors: Ben-David, Alon; Shoham, Gil; Shoham, Yuval;

A Universal Screening Assay for Glycosynthases: Directed Evolution of Glycosynthase XynB2(E335G) Suggests a General Path to Enhance Activity

Abstract

Glycosynthases are catalytic mutants of mainly retaining glycoside hydrolases that catalyze the synthesis of oligosaccharides from their corresponding glycosyl-fluoride donors and suitable acceptors. Here we describe the development of a general, high-throughput screening procedure for glycosynthase activity, which is based on the release of hydrofluoric acid, a by-product of all glycosynthase reactions. This assay is sensitive, does not require the synthesis of special chromophoric or modified substrates, and, most importantly, is applicable for all glycosynthases. We used this screening procedure on error-prone PCR libraries to isolate improved glycosynthase variants of XynB2(E335G) glycosynthase, a family 52 beta-xylosidase from Geobacillus stearothermophilus. The improved variants exhibited higher K(M) values toward the acceptor and the donor, suggesting that enzyme-product release is rate determining for k(cat).

Keywords

Pharmacology, Base Sequence, Clinical Biochemistry, Bacillus, Biochemistry, Polymerase Chain Reaction, Kinetics, CHEMBIO, Xylosidases, Drug Discovery, Molecular Medicine, Directed Molecular Evolution, Molecular Biology, DNA Primers

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    influence
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
47
Top 10%
Top 10%
Top 10%
hybrid