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Cell
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Cell
Article . 2016
License: Elsevier Non-Commercial
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Cell
Article . 2016 . Peer-reviewed
License: Elsevier Non-Commercial
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The 3D Genome as Moderator of Chromosomal Communication

Authors: Dekker, Job; Mirny, Leonid A.;

The 3D Genome as Moderator of Chromosomal Communication

Abstract

Proper expression of genes requires communication with their regulatory elements that can be located elsewhere along the chromosome. The physics of chromatin fibers imposes a range of constraints on such communication. The molecular and biophysical mechanisms by which chromosomal communication is established, or prevented, have become a topic of intense study, and important roles for the spatial organization of chromosomes are being discovered. Here we present a view of the interphase 3D genome characterized by extensive physical compartmentalization and insulation on the one hand and facilitated long-range interactions on the other. We propose the existence of topological machines dedicated to set up and to exploit a 3D genome organization to both promote and censor communication along and between chromosomes.

Country
United States
Keywords

CCCTC-Binding Factor, cohesin, Mitosis, Biochemistry, Chromosomes, Hi-C, Structural Biology, X Chromosome Inactivation, biophysics, Animals, Humans, Molecular Biology, domains, polymers, Adenosine Triphosphatases, promoter, Genome, Biochemistry, Genetics and Molecular Biology(all), condensin, Systems Biology, Computational Biology, Genomics, CTCF, DNA-Binding Proteins, Repressor Proteins, Multiprotein Complexes, gene expression, Female, enhancer, simulations, gene regulation

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    selected citations
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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    888
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 0.1%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    Top 1%
    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
888
Top 0.1%
Top 1%
Top 0.01%
Green
hybrid