
Proper expression of genes requires communication with their regulatory elements that can be located elsewhere along the chromosome. The physics of chromatin fibers imposes a range of constraints on such communication. The molecular and biophysical mechanisms by which chromosomal communication is established, or prevented, have become a topic of intense study, and important roles for the spatial organization of chromosomes are being discovered. Here we present a view of the interphase 3D genome characterized by extensive physical compartmentalization and insulation on the one hand and facilitated long-range interactions on the other. We propose the existence of topological machines dedicated to set up and to exploit a 3D genome organization to both promote and censor communication along and between chromosomes.
CCCTC-Binding Factor, cohesin, Mitosis, Biochemistry, Chromosomes, Hi-C, Structural Biology, X Chromosome Inactivation, biophysics, Animals, Humans, Molecular Biology, domains, polymers, Adenosine Triphosphatases, promoter, Genome, Biochemistry, Genetics and Molecular Biology(all), condensin, Systems Biology, Computational Biology, Genomics, CTCF, DNA-Binding Proteins, Repressor Proteins, Multiprotein Complexes, gene expression, Female, enhancer, simulations, gene regulation
CCCTC-Binding Factor, cohesin, Mitosis, Biochemistry, Chromosomes, Hi-C, Structural Biology, X Chromosome Inactivation, biophysics, Animals, Humans, Molecular Biology, domains, polymers, Adenosine Triphosphatases, promoter, Genome, Biochemistry, Genetics and Molecular Biology(all), condensin, Systems Biology, Computational Biology, Genomics, CTCF, DNA-Binding Proteins, Repressor Proteins, Multiprotein Complexes, gene expression, Female, enhancer, simulations, gene regulation
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