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Biophysical Journal
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Biophysical Journal
Article . 2016 . Peer-reviewed
License: Elsevier Non-Commercial
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https://dx.doi.org/10.48550/ar...
Article . 2016
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A Computational Model of YAP/TAZ Mechanosensing

Authors: Sun, Meng; Spill, Fabian; Zaman, Muhammad H.;

A Computational Model of YAP/TAZ Mechanosensing

Abstract

In cell proliferation, stem cell differentiation, chemoresistance and tissue organization, the ubiquitous role of YAP/TAZ continues to impact our fundamental understanding in numerous physiological and disease systems. YAP/TAZ is an important signaling nexus integrating diverse mechanical and biochemical signals, such as ECM stiffness, adhesion ligand density, or cell-cell contacts, and thus strongly influences cell fate. Recent studies show that YAP/TAZ mechanical sensing is dependent on RhoA-regulated stress fibers. However, current understanding of YAP/TAZ still remains limited due to the unknown interaction between the canonical Hippo pathway and cell tension. To identify the roles of key signaling molecules in mechanical signal sensing and transduction, we present a novel computational model of the YAP/TAZ signaling pathway. This model converts ECM mechanical properties to biochemical signals via adhesion, and integrates intracellular signaling cascades associated with cytoskeleton dynamics. Adhesion molecules, such as FAK, are predicted to rescue YAP/TAZ activity in soft environments via the RhoA pathway. We found that changes of molecule concentrations result in different pattern of YAP/TAZ stiffness response. We also investigate the sensitivity of YAP/TAZ activity to ECM stiffness. In addition, the model shows that the unresolved synergistic effect of YAP/TAZ activity between the mechanosensing and the Hippo pathways can be explained by the interaction of LIMK and LATS. Overall, our model provides a novel platform for studying YAP/TAZ activity in the context of integrating different signaling pathways. This platform can be used to gain new fundamental insights into roles of key molecular and mechanical regulators on development, tissue engineering or tumor progression.

19 pages, 7 pages supporting material, 4 figures, 4 supporting figures

Keywords

rho-Associated Kinases, Quantitative Biology - Subcellular Processes, Myelin and Lymphocyte-Associated Proteolipid Proteins, Intracellular Signaling Peptides and Proteins, FOS: Physical sciences, Mechanotransduction, Cellular, Models, Biological, Actins, Elasticity, Extracellular Matrix, Biological Physics (physics.bio-ph), FOS: Biological sciences, Computer Simulation, Physics - Biological Physics, rhoA GTP-Binding Protein, Subcellular Processes (q-bio.SC), Algorithms, Cytoskeleton, Adaptor Proteins, Signal Transducing

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
84
Top 1%
Top 10%
Top 10%
Green
hybrid