
pmid: 26845354
The definition of stabilization centers was introduced almost two decades ago. They are centers of noncovalent long range interaction clusters, believed to have a role in maintaining the three-dimensional structure of proteins by preventing their decay due to their cooperative long range interactions. Here, this hypothesis is investigated from the viewpoint of thermal stability for the first time, using a large protein thermodynamics database. The positions of amino acids belonging to stabilization centers are correlated with available experimental thermodynamic data on protein thermal stability. Our analysis suggests that stabilization centers, especially solvent exposed ones, do contribute to the thermal stabilization of proteins.
Thermophiles, Models, Molecular, Protein Denaturation, Hot Temperature, Protein Conformation, Molecular Sequence Data, Biophysics, Stability changing mutations, Biochemistry, Structure-Activity Relationship, Protein stability, Transition Temperature, QH3020 Biophysics / biofizika, Computer Simulation, Amino Acid Sequence, Amino Acids, Molecular Biology, QH3011 Biochemistry / biokémia, Protein Stability, Proteins, Stabilization centers, Thermal stability, Cell Biology, Protein Structure, Tertiary, Models, Chemical, Thermodynamics
Thermophiles, Models, Molecular, Protein Denaturation, Hot Temperature, Protein Conformation, Molecular Sequence Data, Biophysics, Stability changing mutations, Biochemistry, Structure-Activity Relationship, Protein stability, Transition Temperature, QH3020 Biophysics / biofizika, Computer Simulation, Amino Acid Sequence, Amino Acids, Molecular Biology, QH3011 Biochemistry / biokémia, Protein Stability, Proteins, Stabilization centers, Thermal stability, Cell Biology, Protein Structure, Tertiary, Models, Chemical, Thermodynamics
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