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pmid: 8635581
Sequence‐specific conformational differences between dinucleotide steps are characterised using published crystal coordinates with special attention to steric hindrance of the methyl group of a T base to the neighbouring base, and, more importantly, to the sugar‐phosphate backbone. The TT step is inflexible and B‐like, as it has two methyl groups which interlock with each other and with the sugar‐phosphate backbones. AT slides, or overtwists, so that the methyl groups move away from the backbones, both lead the step towards the A‐conformation. TA is most flexible as it does not have such restriction. These characteristics are observed with other pyrimidine‐pyrimidine, pyrimidine‐purine, purine‐pyrimidine steps, respectively, but to less extent, depending on the number of non‐A: T basepairs in the steps.
Models, Molecular, Base Sequence, Databases, Factual, Crystal structure, Hydrogen Bonding, DNA, Crystallography, X-Ray, Nucleic acid, Nucleic Acid Conformation, Sequence-structure correlation, Structural biology, Dinucleoside Phosphates
Models, Molecular, Base Sequence, Databases, Factual, Crystal structure, Hydrogen Bonding, DNA, Crystallography, X-Ray, Nucleic acid, Nucleic Acid Conformation, Sequence-structure correlation, Structural biology, Dinucleoside Phosphates
citations This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | 45 | |
popularity This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network. | Average | |
influence This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically). | Top 10% | |
impulse This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network. | Top 10% |