
doi: 10.1007/bf00117404
pmid: 1982629
In a series of compounds with H2-antihistaminic activity, a conformational analysis was performed based on force field calculations. The drugs studied were cimetidine, ranitidine, famotidine, roxatidine and the conformationally more restricted ICI127032. For the compounds containing a flexible chain, the local minima conformations and the global minimum conformation were calculated. These conformations were used for a systematic structural comparison with all energetically allowed conformations of the ICI derivative, with regard to the best fit of the common structural features. In this way a pharmacophore could be developed consisting of four parts: (1) a polar planar group, uncharged at physiological pH; (2) a hydrophobic part formed by aromatic systems or flexible chains; (3) an--under physiological conditions--protonated nitrogen atom; and (4) a substructure, which contains a hydrogen bond donor site and a hydrogen bond acceptor site in a specific spatial arrangement.
Models, Molecular, Binding Sites, Histamine H2 Antagonists, Molecular Structure, Molecular Conformation, Receptors, Histamine H2, Software
Models, Molecular, Binding Sites, Histamine H2 Antagonists, Molecular Structure, Molecular Conformation, Receptors, Histamine H2, Software
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