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Virology
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Virology
Article . 2002
License: Elsevier Non-Commercial
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Virology
Article . 2002 . Peer-reviewed
License: Elsevier Non-Commercial
Data sources: Crossref
Virology
Article . 2002
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Sequence and Organization of the Mamestra configurata Nucleopolyhedrovirus Genome

Authors: Li, Qianjun; Donly, Cam; Li, Lulin; Willis, Leslie G; Theilmann, David A; Erlandson, Martin;

Sequence and Organization of the Mamestra configurata Nucleopolyhedrovirus Genome

Abstract

The nucleotide sequence of the genome of the nucleopolyhedrovirus (NPV) from Mamestra configurata (MacoNPV, isolate 90/2), a group II NPV, was determined and analyzed. The MacoNPV DNA genome consists of 155,060 bp and has an overall G+C content of 41.7%. Computer-assisted analysis predicted 169 open reading frames (ORFs) of 150 nucleotides or greater that showed minimal overlap. BLAST searches and comparisons with completely sequenced baculoviruses indicated that there were 66 ORFs conserved among the nine baculoviruses compared and an additional 17 ORFs were conserved among the NPVs. The gene content and gene arrangement in MacoNPV were most similar to those of SeMNPV, including two putative odv-e66 and p26 gene homologues. However, in contrast to SeMNPV, 8 ORFs with homology to baculovirus repeat ORFs (bro) and single copies of enhancin and conotoxin-like protein ORFs were found in MacoNPV. The MacoNPV genome contained four homologous regions, each with 10 to 17 repeated sequences. Each repeat was 60 to 86 nucleotides in length and contained an approximately 43-bp-long imperfect palindrome. There were 13 ORFs unique to MacoNPV, ranging from a small ORF of 196 bp to larger ORFs of up to 1047 bp, and many of these contained typical early and late baculovirus consensus promoters.

Keywords

Gene Expression Regulation, Viral, Base Sequence, Genes, Viral, genome sequence, Molecular Sequence Data, Genome, Viral, Sequence Analysis, DNA, Nucleopolyhedroviruses, Lepidoptera, Open Reading Frames, Viral Proteins, baculovirus, Virology, DNA, Viral, Animals, nucleopolyhedrovirus

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
101
Top 10%
Top 10%
Top 1%
hybrid