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Virology
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Virology
Article . 2001
License: Elsevier Non-Commercial
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Virology
Article . 2001 . Peer-reviewed
License: Elsevier Non-Commercial
Data sources: Crossref
Virology
Article . 2002
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Complete Genome Analysis of the Mandarin Fish Infectious Spleen and Kidney Necrosis Iridovirus

Authors: He, Jian G.; Deng, Min; Weng, Shao P.; Li, Zheng; Zhou, Song Y.; Long, Qin X.; Wang, Xun Z.; +1 Authors

Complete Genome Analysis of the Mandarin Fish Infectious Spleen and Kidney Necrosis Iridovirus

Abstract

The nucleotide sequence of the infectious spleen and kidney necrosis virus (ISKNV) genome was determined and found to comprise 111,362 bp with a G+C content of 54.78%. It contained 124 potential open reading frames (ORFs) with coding capacities ranging from 40 to 1208 amino acids. The analysis of the amino acid sequences deduced from the individual ORFs revealed that 35 of the 124 potential gene products of ISKNV show significant homology to functionally characterized proteins of other species. Some of the putative gene products of ISKNV showed significant homologies to proteins in the GenBank/EMBL/DDBJ databases including enzymes and structural proteins involved in virus replication, transcription, protein modification, and virus-host interaction. In addition, one major repeated sequence showing significant homology to the Red Sea bream iridovirus (RSIV) genome was identified. Based on the information obtained from biological properties (including histopathology, tissue tropisms, natural host range, and geographic distribution), physiochemical and physical properties, and genome analysis, we suggest that ISKNV, RSIV, sea bass iridovirus, grouper iridovirus, and African lampeye iridovirus may belong to a new genus of the Iridoviridae family and are tentatively referred to as cell hypertrophy iridoviruses.

Related Organizations
Keywords

DNA Replication, sequence analysis, Transcription, Genetic, Molecular Sequence Data, Genome, Viral, phylogeny, Kidney, Iridovirus, Viral Proteins, Sequence Analysis, Protein, Virology, Animals, ISKNV, taxonomic position, cell hypertrophy iridoviruses, Amino Acid Sequence, Databases, Protein, genome, Repetitive Sequences, Nucleic Acid, Viral Structural Proteins, Base Sequence, Sequence Homology, Amino Acid, Nucleotides, Sequence Analysis, DNA, Perciformes, DNA, Viral, Spleen

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    266
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
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    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
266
Top 1%
Top 1%
Top 10%
hybrid