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Virology
Article
License: Elsevier Non-Commercial
Data sources: UnpayWall
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Virology
Article . 2000
License: Elsevier Non-Commercial
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Virology
Article . 2000 . Peer-reviewed
License: Elsevier Non-Commercial
Data sources: Crossref
Virology
Article . 2001
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Cloning of Human Picobirnavirus Genomic Segments and Development of an RT-PCR Detection Assay

Authors: Rosen, Blair I.; Fang, Zhao-Yin; Glass, Roger I.; Monroe, Stephan S.;

Cloning of Human Picobirnavirus Genomic Segments and Development of an RT-PCR Detection Assay

Abstract

Nearly full-length genomic segments 2 and a partial-length genomic segment 1 of human picobirnavirus were cloned and sequenced. The clones were derived from viruses obtained from human immunodeficiency virus (HIV)-infected patients in Atlanta, Georgia (strains 3-GA-91 and 4-GA-91) and a nonHIV-infected person from China (strain 1-CHN-97). The picobirnavirus genomic segments lacked sequence similarities with other viral sequences in GenBank and EMBL. Comparison of genomic segment 1 from a human and a rabbit picobirnavirus identified a region of 127 nucleotides with 54.7% identity. The genomic segments 2 of the 4-GA-91 and 1-CHN-97 strains had 41.4% nucleic acid identity and 30.0% amino acid similarity and contained amino acid motifs typical of RNA-dependent RNA polymerase genes. Reverse transcription-PCR detection assays were developed with primers targeted to the genomic segments 2 of strains 4-GA-91 or 1-CHN-97. Picobirnaviruses related to the China strain were the predominant viruses detected in stool samples from people in four countries on three continents. Picobirnaviruses were detected in samples from two outbreaks of gastroenteritis in long-term elder care facilities but were not determined to be the primary pathogen. Our findings support the view that picobirnaviruses constitute a distinct family of viruses.

Keywords

China, Picornaviridae Infections, Base Sequence, Genes, Viral, Reverse Transcriptase Polymerase Chain Reaction, Molecular Sequence Data, Argentina, HIV Infections, Picornaviridae, RNA-Dependent RNA Polymerase, Gastroenteritis, Feces, Virology, Homes for the Aged, Humans, RNA, Viral, Amino Acid Sequence, Cloning, Molecular, Sequence Alignment, Phylogeny, DNA Primers

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    This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
    116
    popularity
    This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
    Top 10%
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
116
Top 10%
Top 1%
Top 10%
hybrid