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QSAR & Combinatorial Science
Article . 2008 . Peer-reviewed
License: Wiley Online Library User Agreement
Data sources: Crossref
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QSAR & Combinatorial Science
Article . 2008 . Peer-reviewed
License: Wiley Online Library User Agreement
Data sources: Crossref
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An Atom Counting QSPR Protocol

Authors: Santanab Giri; Dehesh R. Roy; Sofie Van Damme; Patrick Bultinck; Venkatesan Subramanian; Pratim K. Chattaraj;

An Atom Counting QSPR Protocol

Abstract

AbstractA simple descriptor, viz the number of carbon (NC)/non‐hydrogenic (NNH) atoms present in a molecule, is proposed for the development of useful Quantitative Structure–Property–Relationship (QSPR) models. This work is prompted by that of Randic and Basak (J. Chem. Inf. Comput. Sci. 2001, 41, 614–618) who have shown that this descriptor is superior to the simple connectivity index and is marginally worse than the variable connectivity index for analyzing the toxicity of aliphatic ethers. It is tested in the present work in models pertaining to the estimation of boiling point of alcohols, enthalpy of vaporization of Polychlorinated Biphenyls (PCBs), n‐octanol/water partition coefficient of PCBs and chloroanisoles, pKa values of carboxylic acids, phenols, alcohols, etc. High values of various regression coefficients (R2, $\rm{ R_{{\rm{CV}}}^2 }$, $\rm{ R_{{\rm{Ad}}}^2 }$) suggest the significance of this descriptor which further improves in the resulting two‐parameter QSPR models with electrophilicity or its local variant as an additional descriptor. Other statistical quantities are also analyzed for gaining additional insights into the proposed models. Although the atom number is not the best possible descriptor in a QSPR model in all cases, its simplicity provides it a special place in the development of those models. The present analysis extends the work of Randic and Basak by delineating the situations when NC/NNH performs well vis‐a‐vis the other descriptors.

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    17
    popularity
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    Top 10%
    influence
    This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
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    impulse
    This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
17
Top 10%
Average
Top 10%
bronze