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Proteins Structure Function and Bioinformatics
Article . 2016 . Peer-reviewed
License: CC BY
Data sources: Crossref
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PubMed Central
Other literature type . 2016
Data sources: PubMed Central
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Open and compressed conformations of Francisella tularensis ClpP

Authors: Díaz-Sáez, Laura; Pankov, Genady; Hunter, William N.;
APC: 2,166.66 EUR

Open and compressed conformations of Francisella tularensis ClpP

Abstract

ABSTRACTCaseinolytic proteases are large oligomeric assemblies responsible for maintaining protein homeostasis in bacteria and in so doing influence a wide range of biological processes. The functional assembly involves three chaperones together with the oligomeric caseinolytic protease catalytic subunit P (ClpP). This protease represents a potential target for therapeutic intervention in pathogenic bacteria. Here, we detail an efficient protocol for production of recombinant ClpP from Francisella tularensis, and the structural characterization of three crystal forms which grow under similar conditions. One crystal form reveals a compressed state of the ClpP tetradecamer and two forms an open state. A comparison of the two types of structure infers that differences at the enzyme active site result from a conformational change involving a highly localized disorder‐order transition of a β‐strand α‐helix combination. This transition occurs at a subunit‐subunit interface. Our study may now underpin future efforts in a structure‐based approach to target ClpP for inhibitor or activator development. Proteins 2016; 85:188–194. © 2016 Wiley Periodicals, Inc.

Country
United Kingdom
Related Organizations
Keywords

Models, Molecular, Protein Conformation, alpha-Helical, 570, Gene Expression, Crystallography, X-Ray, Substrate Specificity, conformational change, Bacterial Proteins, Catalytic Domain, Escherichia coli, Protein Interaction Domains and Motifs, Cloning, Molecular, Francisella tularensis, X-ray crystallography, protease, Endopeptidase Clp, active site, 540, Recombinant Proteins, Kinetics, Protein Subunits, Protein Conformation, beta-Strand, Structure Notes, Protein Multimerization, Protein Binding

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
10
Top 10%
Average
Average
Green
hybrid