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Protein Science
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Protein Science
Article . 2011 . Peer-reviewed
License: Wiley Online Library User Agreement
Data sources: Crossref
Protein Science
Article . 2011
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Structure analysis reveals the flexibility of the ADAMTS‐5 active site

Authors: Huey-Sheng, Shieh; Alfredo G, Tomasselli; Karl J, Mathis; Mark E, Schnute; Scott S, Woodard; Nicole, Caspers; Jennifer M, Williams; +5 Authors

Structure analysis reveals the flexibility of the ADAMTS‐5 active site

Abstract

AbstractA ((1S,2R)‐2‐hydroxy‐2,3‐dihydro‐1H‐inden‐1‐yl) succinamide derivative (here referred to as Compound 12) shows significant activity toward many matrix metalloproteinases (MMPs), including MMP‐2, MMP‐8, MMP‐9, and MMP‐13. Modeling studies had predicted that this compound would not bind to ADAMTS‐5 (a disintegrin and metalloproteinase with thrombospondin motifs‐5) due to its shallow S1′ pocket. However, inhibition analysis revealed it to be a nanomolar inhibitor of both ADAMTS‐4 and −5. The observed inconsistency was explained by analysis of crystallographic structures, which showed that Compound 12 in complex with the catalytic domain of ADAMTS‐5 (cataTS5) exhibits an unusual conformation in the S1′ pocket of the protein. This first demonstration that cataTS5 can undergo an induced conformational change in its active site pocket by a molecule like Compound 12 should enable the design of new aggrecanase inhibitors with better potency and selectivity profiles.

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Keywords

Models, Molecular, Molecular Structure, Protein Conformation, Molecular Sequence Data, Succinates, Matrix Metalloproteinase Inhibitors, Amides, Matrix Metalloproteinases, ADAM Proteins, Catalytic Domain, Drug Design, Animals, Humans, Cattle, ADAMTS5 Protein

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selected citations
These citations are derived from selected sources.
This is an alternative to the "Influence" indicator, which also reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Citations provided by BIP!
popularity
This indicator reflects the "current" impact/attention (the "hype") of an article in the research community at large, based on the underlying citation network.
BIP!Popularity provided by BIP!
influence
This indicator reflects the overall/total impact of an article in the research community at large, based on the underlying citation network (diachronically).
BIP!Influence provided by BIP!
impulse
This indicator reflects the initial momentum of an article directly after its publication, based on the underlying citation network.
BIP!Impulse provided by BIP!
19
Average
Top 10%
Top 10%
bronze